關於「HISAT2 dta」標籤，搜尋引擎有相關的訊息討論：

HISAT2 graph-based alignment of next generation sequencing ...。

HISAT2 is a fast and sensitive alignment program for mapping ... Due to a policy change (HTTP to HTTPS) in using SRA data ( --sra-option ), users are ...： 。

Manual | HISAT2。

HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (whole-genome, transcriptome, and exome sequencing data) ...： 。

Comparison of Burrows-Wheeler Transform-Based Mapping ... - NCBI。

2018年2月26日 · To our knowledge, this is the first evaluation of HISAT2 applied to whole-genome sequence data. Go to: Materials and methods. Data sets. Real ...： tw | tw。

Graph-Based Genome Alignment and Genotyping with ... - NCBI。

2020年11月2日 · Here we describe the algorithms underlying HISAT2 and HISAT-genotype. HISAT2 implements a novel graph-based data structure along with an ...： 。

Graph-based genome alignment and genotyping with ... - Europe PMC。

We apply HISAT2 for HLA typing and DNA fingerprinting; both applications form part of ... HISAT2 implements a novel graph-based data structure along with an ...。

Cloud accelerated alignment and assembly of full-length single-cell ...。

2019年12月30日 · Falco is a significantly updated open source big data processing framework ... The alignment tool - STAR or HISAT2 - is then executed using ...。

HSRA: Hadoop-based spliced read aligner for RNA sequencing data。

2018年7月31日 · The default mode of HISAT2 follows a novel hybrid approach that collects splice sites as it processes the reads, similarly to the first run of ...。

HISAT - Center for Computational Biology。

We recommend that the HISAT and TopHat2 users switch to HISAT2. ... HISAT is now able to work directly with SRA data: both downloaded on demand over ...： 。

Pangenome Graphs | Annual Review of Genomics and Human ...。

HISAT2 can map RNA-seq data in addition to genomic DNA (71). It is based on the RNA mapper HISAT (70) and retains the capacity for spliced alignment.。

Systems Medicine: Integrative, Qualitative and Computational ...。

ClinQC: A tool for quality control and cleaning of sanger and NGS data in ... Transcript-level expression analysis of RNA-seq experiments with HISAT, ...